STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_1503PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rpb:RPB_3817 hypothetical protein. (602 aa)    
Predicted Functional Partners:
RPE_1504
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_1486 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.978
RPE_0965
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.971
RPE_1552
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_1518 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.965
RPE_1505
Conserved hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.961
RPE_0967
KEGG: rpc:RPC_0943 putative flagellar assembly protein FliH.
 
  
 0.957
RPE_1538
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_1507 flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.954
fliQ-2
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.954
RPE_1539
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.953
RPE_1551
Flagellar basal body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.952
RPE_1542
KEGG: rpc:RPC_1511 hypothetical protein.
 
  
 0.950
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.