STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_1541KEGG: rpc:RPC_1510 hypothetical protein. (144 aa)    
Predicted Functional Partners:
RPE_1542
KEGG: rpc:RPC_1511 hypothetical protein.
 
     0.962
RPE_1540
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rpc:RPC_1509 flagellar motor switch protein FliM.
 
     0.959
RPE_1539
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.919
RPE_1543
KEGG: rpc:RPC_1512 tetratricopeptide TPR_2.
 
     0.896
RPE_1536
KEGG: rpc:RPC_1505 flageller protein FlgA.
 
     0.818
RPE_1529
KEGG: rpc:RPC_1495 hypothetical protein.
  
     0.773
RPE_0967
KEGG: rpc:RPC_0943 putative flagellar assembly protein FliH.
  
     0.762
RPE_1505
Conserved hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.759
RPE_1530
KEGG: rpc:RPC_1496 hypothetical protein.
  
     0.758
RPE_1877
KEGG: rpc:RPC_1784 hypothetical protein.
  
     0.757
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.