STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_1992Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (117 aa)    
Predicted Functional Partners:
RPE_2558
PFAM: phosphatidate cytidylyltransferase; KEGG: rpc:RPC_2441 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.928
RPE_4829
PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4864 phospholipid/glycerol acyltransferase.
    
 0.913
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.902
RPE_4505
KEGG: rpc:RPC_1274 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase.
     
  0.900
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: rpc:RPC_0045 glycerol-3-phosphate dehydrogenase (NAD(P)+).
     
 0.844
RPE_1991
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: rpc:RPC_2080 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II.
       0.828
RPE_1378
PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1361 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.806
nadE-2
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.720
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.575
RPE_1990
KEGG: rpc:RPC_2079 hypothetical protein.
       0.566
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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