Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
RPE_2192Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF). (113 aa)    
Predicted Functional Partners:
RPE_2191
Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_3251 transcriptional regulator/antitoxin, MazE.
 
 
 0.994
RPE_1972
Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
  
 
 0.889
RPE_4101
Transcriptional regulator/antitoxin, MazE; TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_1412 SpoVT/AbrB-like.
 
 
 0.839
RPE_2207
Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain protein; KEGG: nmu:Nmul_A0985 transcriptional regulator/antitoxin, MazE.
  
 
 0.818
RPE_2627
PFAM: protein of unknown function DUF433; KEGG: rpc:RPC_2499 protein of unknown function DUF433.
  
   
 0.604
RPE_4748
PFAM: protein of unknown function DUF433; KEGG: rpa:RPA0826 DUF433.
  
   
 0.561
RPE_2190
Putative AtsE; KEGG: rpc:RPC_3252 putative AtsE.
       0.514
RPE_1830
Putative transcriptional regulators, CopG/Arc/MetJ family; TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
 
 
 
 0.513
RPE_1604
Putative transcriptional regulators, CopG/Arc/MetJ family; KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
 
 
 
 0.496
RPE_2423
KEGG: rpb:RPB_2524 hypothetical protein.
  
     0.485
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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