STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_2256PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpd:RPD_2206 enoyl-CoA hydratase/isomerase. (259 aa)    
Predicted Functional Partners:
RPE_2255
PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpd:RPD_2205 carbamoyl-phosphate synthase L chain, ATP-binding.
 
 0.929
RPE_2254
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rpc:RPC_3201 propionyl-CoA carboxylase.
  
 
 0.853
RPE_0248
KEGG: rpb:RPB_0525 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.834
RPE_0121
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0552 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.808
RPE_2249
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3266 acyl-CoA dehydrogenase-like.
  
 0.747
RPE_0120
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_0271 acyl-CoA dehydrogenase-like.
 
 0.746
RPE_2248
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3267 acyl-CoA dehydrogenase-like.
  
 0.743
RPE_1794
KEGG: rpa:RPA1776 possible lipid transfer protein.
 
 0.725
RPE_1701
KEGG: rpd:RPD_1858 putative acetyl-CoA acetyltransferase.
 
 0.716
RPE_0073
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA0995 probable acyl-CoA dehydrogenase.
  
 0.710
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.