STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_2291PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3165 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)    
Predicted Functional Partners:
RPE_3683
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_3643 NAD-dependent epimerase/dehydratase.
    0.679
RPE_4235
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5976 putative oxidoreductase.
 
    0.555
RPE_0118
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KEGG: rpc:RPC_0553 short-chain dehydrogenase/reductase SDR.
    0.538
RPE_3689
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_3649 short-chain dehydrogenase/reductase SDR.
 
    0.538
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.461
RPE_3692
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: rpc:RPC_4481 iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.452
RPE_2290
PFAM: acyltransferase 3; KEGG: bja:bll7034 MDO-like protein.
       0.427
RPE_4786
Periplasmic sensor hybrid histidine kinase; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4823 periplasmic sensor hybrid histidine kinase.
   
  
 0.426
RPE_4317
L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
    0.418
RPE_3905
Coenzyme F390 synthetase-like protein; KEGG: cvi:CV4319 hypothetical protein.
  
  
 0.411
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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