node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPE_2178 | RPE_2179 | RPE_2178 | RPE_2179 | HflK protein; HflC and HflK could encode or regulate a protease. | HflC protein; HflC and HflK could regulate a protease. | 0.998 |
RPE_2178 | RPE_2485 | RPE_2178 | RPE_2485 | HflK protein; HflC and HflK could encode or regulate a protease. | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | 0.927 |
RPE_2179 | RPE_2178 | RPE_2179 | RPE_2178 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.998 |
RPE_2179 | RPE_2485 | RPE_2179 | RPE_2485 | HflC protein; HflC and HflK could regulate a protease. | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | 0.919 |
RPE_2485 | RPE_2178 | RPE_2485 | RPE_2178 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.927 |
RPE_2485 | RPE_2179 | RPE_2485 | RPE_2179 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | HflC protein; HflC and HflK could regulate a protease. | 0.919 |
RPE_2485 | RPE_4808 | RPE_2485 | RPE_4808 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | PFAM: band 7 protein; KEGG: rpd:RPD_0862 band 7 protein. | 0.817 |
RPE_2485 | rplB | RPE_2485 | RPE_3583 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.818 |
RPE_2485 | rplM | RPE_2485 | RPE_2857 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.797 |
RPE_2485 | rpsE | RPE_2485 | RPE_3569 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.813 |
RPE_2485 | rpsG | RPE_2485 | RPE_3590 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.810 |
RPE_2485 | rpsI | RPE_2485 | RPE_2858 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | PFAM: ribosomal protein S9; KEGG: rpb:RPB_2672 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.820 |
RPE_2485 | rpsJ | RPE_2485 | RPE_3587 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.799 |
RPE_2485 | rpsK | RPE_2485 | RPE_3563 | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.806 |
RPE_4808 | RPE_2485 | RPE_4808 | RPE_2485 | PFAM: band 7 protein; KEGG: rpd:RPD_0862 band 7 protein. | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | 0.817 |
rplB | RPE_2485 | RPE_3583 | RPE_2485 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; Belongs to the AAA ATPase family. | 0.818 |
rplB | rplM | RPE_3583 | RPE_2857 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplB | rpsE | RPE_3583 | RPE_3569 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rplB | rpsG | RPE_3583 | RPE_3590 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rplB | rpsI | RPE_3583 | RPE_2858 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | PFAM: ribosomal protein S9; KEGG: rpb:RPB_2672 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |