Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPE_0434 | RPE_0724 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | KEGG: rpc:RPC_0752 hypothetical protein. | 0.772 |
RPE_0434 | RPE_1755 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | KEGG: rpc:RPC_4024 hypothetical protein. | 0.752 |
RPE_0434 | RPE_1879 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | PFAM: protein of unknown function DUF1214; KEGG: rpc:RPC_1786 protein of unknown function DUF1214. | 0.636 |
RPE_0434 | RPE_2308 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | KEGG: rpc:RPC_3148 hypothetical protein. | 0.754 |
RPE_0434 | RPE_2333 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | KEGG: rpc:RPC_3126 hypothetical protein. | 0.770 |
RPE_0434 | RPE_2794 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | PFAM: Invasion associated locus B family protein; KEGG: rpc:RPC_2614 invasion associated locus B. | 0.765 |
RPE_0434 | RPE_2998 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | KEGG: bja:blr4700 putative outer-membrane immunogenic protein precursor. | 0.759 |
RPE_0434 | RPE_4174 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4120 protein of unknown function DUF992. | 0.643 |
RPE_0434 | RPE_4386 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4328 hypothetical protein. | 0.706 |
RPE_0434 | RPE_4750 | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_0813 invasion associated locus B. | 0.743 |
RPE_0724 | RPE_0434 | KEGG: rpc:RPC_0752 hypothetical protein. | PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150. | 0.772 |
RPE_0724 | RPE_1755 | KEGG: rpc:RPC_0752 hypothetical protein. | KEGG: rpc:RPC_4024 hypothetical protein. | 0.738 |
RPE_0724 | RPE_1879 | KEGG: rpc:RPC_0752 hypothetical protein. | PFAM: protein of unknown function DUF1214; KEGG: rpc:RPC_1786 protein of unknown function DUF1214. | 0.755 |
RPE_0724 | RPE_2308 | KEGG: rpc:RPC_0752 hypothetical protein. | KEGG: rpc:RPC_3148 hypothetical protein. | 0.773 |
RPE_0724 | RPE_2333 | KEGG: rpc:RPC_0752 hypothetical protein. | KEGG: rpc:RPC_3126 hypothetical protein. | 0.771 |
RPE_0724 | RPE_2794 | KEGG: rpc:RPC_0752 hypothetical protein. | PFAM: Invasion associated locus B family protein; KEGG: rpc:RPC_2614 invasion associated locus B. | 0.765 |
RPE_0724 | RPE_2998 | KEGG: rpc:RPC_0752 hypothetical protein. | KEGG: bja:blr4700 putative outer-membrane immunogenic protein precursor. | 0.667 |
RPE_0724 | RPE_4174 | KEGG: rpc:RPC_0752 hypothetical protein. | PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4120 protein of unknown function DUF992. | 0.514 |
RPE_0724 | RPE_4386 | KEGG: rpc:RPC_0752 hypothetical protein. | TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4328 hypothetical protein. | 0.763 |
RPE_0724 | RPE_4750 | KEGG: rpc:RPC_0752 hypothetical protein. | PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_0813 invasion associated locus B. | 0.748 |
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