STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_3533KEGG: rpd:RPD_3120 hypothetical protein. (182 aa)    
Predicted Functional Partners:
RPE_3065
KEGG: rpa:RPA2069 hypothetical protein.
  
     0.650
RPE_3818
KEGG: rpc:RPC_2204 hypothetical protein.
  
     0.587
RPE_0826
KEGG: rpc:RPC_0592 hypothetical protein.
  
     0.571
RPE_0288
KEGG: rpa:RPA0183 hypothetical protein.
  
     0.549
RPE_3946
KEGG: rpd:RPD_1472 hypothetical protein.
  
     0.526
RPE_4499
PFAM: protein of unknown function DUF1522; KEGG: rpa:RPA2297 hypothetical protein.
  
     0.516
RPE_3532
PFAM: protein of unknown function DUF1295; KEGG: rpd:RPD_3119 protein of unknown function DUF1295.
       0.509
RPE_2111
KEGG: rpb:RPB_1999 hypothetical protein.
  
     0.485
RPE_1525
Protein of unknown function DUF1522; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.482
RPE_1523
Protein of unknown function DUF1522; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.449
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.