STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_3536PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rru:Rru_A2643 glycerophosphoryl diester phosphodiesterase. (413 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.916
RPE_0686
PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0764 alpha/beta hydrolase fold.
    
 0.915
RPE_1805
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rpc:RPC_1711 ethanolamine ammonia lyase large subunit.
     
  0.900
eutC
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: rpc:RPC_1713 ethanolamine ammonia-lyase; Belongs to the EutC family.
     
  0.900
RPE_1378
PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1361 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.830
RPE_0033
PFAM: Alkaline phosphatase; KEGG: rpc:RPC_0030 alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
  
 0.595
RPE_4889
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0778 phosphate transport system permease protein 2.
  
  
 0.517
RPE_3537
Hypothetical protein; KEGG: cvi:CV2871 probable hemagglutinin.
       0.463
RPE_3538
Hypothetical protein.
       0.463
RPE_4887
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.437
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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