STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_3737PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1798 ABC transporter related. (231 aa)    
Predicted Functional Partners:
RPE_3739
PFAM: inner-membrane translocator; KEGG: rpc:RPC_3700 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
RPE_3740
PFAM: inner-membrane translocator; KEGG: rpc:RPC_3701 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.982
RPE_3741
Branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor; KEGG: rpd:RPD_3510 twin-arginine translocation pathway signal.
 
 
 0.974
RPE_4600
PFAM: inner-membrane translocator; KEGG: rpd:RPD_3862 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
RPE_4601
PFAM: inner-membrane translocator; KEGG: rpb:RPB_1253 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
RPE_4602
KEGG: rpd:RPD_3864 amide-UreA binding protein.
 
 
 0.948
RPE_4598
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1256 ABC transporter related.
  
  
 
0.905
RPE_0595
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1019 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
0.819
RPE_3208
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3424 ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.807
RPE_3796
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3572 branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.807
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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