STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4101Transcriptional regulator/antitoxin, MazE; TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_1412 SpoVT/AbrB-like. (84 aa)    
Predicted Functional Partners:
RPE_4100
TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rpb:RPB_1433 death-on-curing protein.
 
   
 0.967
RPE_2192
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF).
 
 
 0.822
RPE_4723
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; KEGG: rpa:RPA0941 hypothetical protein.
  
 
 0.798
RPE_4102
TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: rpc:RPC_3974 peptidase M3B, oligoendopeptidase-related clade 3.
       0.612
RPE_4099
PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: rpc:RPC_3969 aa3 type cytochrome c oxidase subunit IV.
       0.489
RPE_4136
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.407
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.