STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4289KEGG: rpc:RPC_4252 hypothetical protein. (401 aa)    
Predicted Functional Partners:
RPE_0698
KEGG: rpc:RPC_0771 hypothetical protein.
  
     0.773
RPE_1878
KEGG: rpc:RPC_1785 hypothetical protein.
  
     0.773
RPE_1847
KEGG: rpc:RPC_1755 hypothetical protein.
 
 
 0.771
RPE_2973
KEGG: rpc:RPC_2847 hypothetical protein.
 
    0.769
RPE_1996
KEGG: rpc:RPC_2084 hypothetical protein.
  
     0.768
RPE_1474
KEGG: rpc:RPC_1455 hypothetical protein.
  
     0.755
RPE_2333
KEGG: rpc:RPC_3126 hypothetical protein.
  
     0.755
RPE_1931
KEGG: rpc:RPC_1833 hypothetical protein.
  
     0.753
RPE_4823
KEGG: rpc:RPC_4859 hypothetical protein.
  
     0.751
RPE_1877
KEGG: rpc:RPC_1784 hypothetical protein.
  
     0.748
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.