Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4367KEGG: rpc:RPC_4317 hypothetical protein. (205 aa)    
Predicted Functional Partners:
RPE_4368
KEGG: rpc:RPC_4316 hypothetical protein.
  
    0.780
RPE_4369
TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: rpc:RPC_4315 nitrogenase-associated protein; Belongs to the ArsC family.
       0.769
RPE_2233
PFAM: protein of unknown function DUF1636; KEGG: rpb:RPB_0741 protein of unknown function DUF1636.
  
     0.535
RPE_4370
PFAM: protein of unknown function DUF88; KEGG: rpa:RPA3960 hypothetical protein.
       0.482
RPE_4366
KEGG: rpc:RPC_4318 ModD protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
       0.453
RPE_4532
KEGG: rpc:RPC_4462 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1.
   
    0.449
RPE_4539
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpc:RPC_4470 HesB/YadR/YfhF; Belongs to the HesB/IscA family.
   
    0.449
RPE_4364
KEGG: rpc:RPC_4320 hypothetical protein.
 
    
0.408
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.