STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4435PFAM: protein of unknown function DUF1159; KEGG: rpc:RPC_4371 protein of unknown function DUF1159. (158 aa)    
Predicted Functional Partners:
atpF1
H+-transporting two-sector ATPase, B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
     0.763
RPE_0428
PFAM: OstA family protein; KEGG: rpc:RPC_0417 OstA-like protein.
  
     0.759
RPE_4436
Conserved hypothetical protein; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_4372 twin-arginine translocation pathway signal.
 
     0.729
RPE_0162
KEGG: rpc:RPC_0510 hypothetical protein.
  
     0.702
RPE_2145
PFAM: protein of unknown function DUF1321; KEGG: rpc:RPC_3270 protein of unknown function DUF1321.
  
     0.700
RPE_1431
KEGG: rpc:RPC_1410 hypothetical protein.
  
     0.698
RPE_2205
KEGG: bja:bll6480 hypothetical protein.
 
     0.693
RPE_4107
KEGG: rpc:RPC_3979 hypothetical protein; Belongs to the UPF0335 family.
  
     0.691
RPE_0322
PFAM: transcription activator, effector binding; KEGG: rpc:RPC_0216 transcription activator, effector binding.
 
     0.690
RPE_3446
KEGG: rpa:RPA3183 hypothetical protein.
  
     0.660
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.