STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4483PFAM: Uncharacterised conserved protein UCP032146; KEGG: rpb:RPB_4349 uncharacterised conserved protein UCP032146; Belongs to the UPF0262 family. (163 aa)    
Predicted Functional Partners:
RPE_4482
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_4415 protein tyrosine phosphatase.
     0.891
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.875
RPE_1606
PFAM: protein of unknown function DUF1476; KEGG: rpc:RPC_1583 protein of unknown function DUF1476.
  
     0.687
RPE_3381
PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_2237 protein of unknown function DUF983.
 
   
 0.650
RPE_4757
PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_4793 protein of unknown function DUF983.
 
   
 0.637
RPE_4721
PFAM: thiamine monophosphate synthase; KEGG: rpc:RPC_4774 thiamine monophosphate synthase.
  
     0.624
RPE_0786
PFAM: Disulphide bond formation protein DsbB; KEGG: rpc:RPC_0627 disulphide bond formation protein DsbB.
  
     0.602
RPE_0308
KEGG: nha:Nham_0406 hypothetical protein.
  
     0.533
RPE_0132
KEGG: rpc:RPC_0540 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A.
  
     0.523
RPE_2635
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: rpc:RPC_2888 NADH:ubiquinone oxidoreductase 17.2 kD subunit.
  
   
 0.514
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.