Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPE_4530KEGG: rpc:RPC_4460 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; BFD domain protein [2Fe-2S]-binding domain protein; Belongs to the NifD/NifK/NifE/NifN family. (554 aa)    
Predicted Functional Partners:
RPE_4529
KEGG: rpc:RPC_4459 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.994
nifH-2
Nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.977
RPE_4525
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpa:RPA4612 ferredoxin 2[4Fe-4S] III, FdxB.
 
  
 0.973
RPE_4531
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
0.965
nifH
Nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.963
RPE_4528
TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: rpc:RPC_4458 dinitrogenase iron-molybdenum cofactor biosynthesis.
 
 
 0.963
RPE_3881
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_4681 nitrogenase; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.961
RPE_4541
TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM domain protein; KEGG: rpc:RPC_4472 nitrogenase cofactor biosynthesis protein NifB.
 
  
 0.956
RPE_4527
PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269.
 
  
 0.953
RPE_3190
Nitrogenase; PFAM: NifH/frxC-family protein; KEGG: rpa:RPA2615 putative nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase); Belongs to the NifH/BchL/ChlL family.
 
 
 0.952
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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