STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4576ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. (312 aa)    
Predicted Functional Partners:
RPE_4574
KEGG: nha:Nham_3634 hypothetical protein.
 
    0.914
RPE_4575
KEGG: nha:Nham_3635 hypothetical protein.
 
    0.910
RPE_4573
PFAM: PepSY-associated TM helix domain protein; KEGG: nwi:Nwi_2813 PepSY-associated TM helix.
 
     0.824
RPE_3094
PFAM: FMN-binding domain protein; KEGG: rpb:RPB_3141 FMN-binding.
 
  
 0.588
RPE_1259
Sulfite reductase (NADPH) alpha subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; KEGG: rpb:RPB_1753 oxidoreductase, FAD/NAD(P)-binding.
 
  
 0.503
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
  
 0.497
RPE_1971
KEGG: rpc:RPC_1952 ABC-type Co2+ transport system, periplasmic component.
  
    0.426
RPE_4295
KEGG: rpc:RPC_1958 hypothetical protein.
  
    0.426
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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