STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (162 aa)    
Predicted Functional Partners:
RPE_0341
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.935
RPE_0718
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: rpc:RPC_0758 carbonate dehydratase.
     
  0.900
RPE_4637
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_2055 nitrate transport permease.
 
   
 0.871
RPE_4636
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2056 ABC transporter related.
 
   
 0.860
RPE_4638
ABC-type nitrate transport system periplasmic component; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_2054 twin-arginine translocation pathway signal.
 
   
 0.846
RPE_1264
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1759 nitrate transport permease.
 
   
 0.533
RPE_1265
ABC-type nitrate transport system periplasmic component; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal.
 
   
 0.513
RPE_1258
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1752 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
   
 0.448
RPE_4639
KEGG: rpb:RPB_2053 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase.
 
     0.447
RPE_1263
KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.442
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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