Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPE_4643PFAM: peptidase S1 and S6, chymotrypsin/Hap; phospholipase D/Transphosphatidylase; KEGG: rpc:RPC_3413 hypothetical protein. (962 aa)    
Predicted Functional Partners:
RPE_3044
KEGG: bja:bll1305 hypothetical protein.
  
     0.763
RPE_0811
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT0759 hypothetical protein.
 
   
 0.757
RPE_2198
PFAM: sulfatase; KEGG: rpc:RPC_3246 sulfatase.
  
   
 0.755
RPE_3251
Endonuclease; KEGG: eba:ebA6352 endonuclease.
    
 0.742
RPE_4668
KEGG: rpc:RPC_4667 methyl-accepting chemotaxis sensory transducer.
 
     0.708
RPE_1748
PFAM: HWE histidine kinase; KEGG: rpc:RPC_4031 signal transduction histidine kinase.
 
     0.680
RPE_3595
PFAM: amine oxidase; Methyltransferase type 11; KEGG: rpc:RPC_3456 methyltransferase type 11.
  
     0.630
RPE_0841
KEGG: bja:bsl6204 hypothetical protein.
  
     0.601
RPE_4616
KEGG: rpb:RPB_1860 alpha/beta hydrolase.
 
   
 0.585
RPE_2634
KEGG: rpc:RPC_2889 hypothetical protein.
  
     0.575
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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