STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4676PFAM: response regulator receiver; KEGG: rpc:RPC_4677 response regulator receiver domain protein (CheY-like). (121 aa)    
Predicted Functional Partners:
RPE_4674
PFAM: CheW domain protein; KEGG: rpc:RPC_4675 CheW protein.
 
 0.981
RPE_4675
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4676 CheA signal transduction histidine kinases.
 
 0.981
RPE_4673
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4674 methyl-accepting chemotaxis sensory transducer.
 
 0.955
RPE_0865
KEGG: rpc:RPC_4723 hypothetical protein.
  
 0.950
RPE_4671
PFAM: CheW domain protein; KEGG: rpc:RPC_4670 CheW protein.
 
 0.936
RPE_3628
PFAM: CheC domain protein; KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation.
  
 
 0.934
RPE_3638
PFAM: CheC domain protein; KEGG: rpc:RPC_4614 CheC, inhibitor of MCP methylation.
  
 
 0.934
RPE_4672
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4672 methyl-accepting chemotaxis sensory transducer.
 
 0.931
RPE_1370
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; KEGG: rpc:RPC_1355 multi-sensor hybrid histidine kinase.
 
 
 0.928
RPE_0968
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.914
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.