STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE_4804Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rpc:RPC_4839 peptidyl-dipeptidase DCP. (696 aa)    
Predicted Functional Partners:
RPE_4805
PFAM: protein of unknown function DUF1007; KEGG: rpb:RPB_4544 protein of unknown function DUF1007.
       0.875
RPE_4806
PFAM: high-affinity nickel-transporter; KEGG: rpc:RPC_4841 high-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.811
RPE_4803
KEGG: rpb:RPB_4546 hypothetical protein.
       0.585
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.557
RPE_2484
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpd:RPD_3368 ATP-binding region, ATPase-like.
  
  
 0.482
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
  
 0.482
RPE_4808
PFAM: band 7 protein; KEGG: rpd:RPD_0862 band 7 protein.
  
  
 0.425
groL1
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.420
RPE_1599
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1575 peptidase S9, prolyl oligopeptidase active site region.
  
 
 0.420
groL2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.420
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.