Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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[Homology]
Score
RPE_4841KEGG: rpc:RPC_4874 hypothetical protein. (83 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.828
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
    
   0.795
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: rpc:RPC_4875 argininosuccinate lyase.
       0.621
RPE_4108
PFAM: protein of unknown function DUF1244; KEGG: rpb:RPB_1425 protein of unknown function DUF1244.
   
    0.420
RPE_4843
PFAM: Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like.
       0.414
RPE_4844
PFAM: protein of unknown function DUF1428; KEGG: rpd:RPD_0934 protein of unknown function DUF1428.
       0.411
hisE
PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rpc:RPC_0311 phosphoribosyl-ATP pyrophosphohydrolase.
   
    0.403
hisE-2
PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rpc:RPC_0716 phosphoribosyl-ATP pyrophosphohydrolase.
   
    0.403
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
   
    0.403
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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