Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPC_0079Protein of unknown function DUF214. (821 aa)    
Predicted Functional Partners:
RPC_0078
Conserved hypothetical protein.
 
  
 0.982
RPC_0080
ABC transporter related.
 
  
 0.961
RPC_1288
Hydroxyneurosporene synthase.
  
  
 0.677
macB
ABC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.634
RPC_0081
Protein of unknown function DUF201.
       0.543
RPC_0077
Membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG).
       0.542
RPC_0198
ABC transporter related.
   
 
 0.539
RPC_0197
Lipolytic enzyme, G-D-S-L.
   
   0.416
RPC_4910
Lipolytic enzyme, G-D-S-L.
   
   0.416
RPC_4911
Conserved hypothetical protein.
   
   0.416
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.