Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gfaGlutathione-dependent formaldehyde-activating, GFA; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (189 aa)    
Predicted Functional Partners:
RPC_0099
Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde.
 
  
 0.972
RPC_0101
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.969
RPC_1907
Pyrrolo-quinoline quinone.
 
  
 0.939
RPC_1908
Extracellular solute-binding protein, family 3.
 
  
 0.938
RPC_1909
Cytochrome c, class I; Electron acceptor for MDH. Acts in methanol oxidation.
     
 0.903
RPC_1910
Methanol dehydrogenase, beta subunit; Catalyzes the oxidation of primary alcohols including methanol.
     
  0.900
RPC_1913
MxaA protein, putative.
     
  0.900
RPC_1914
Von Willebrand factor, type A.
     
  0.900
RPC_1915
Hypothetical protein.
     
  0.900
RPC_1916
Von Willebrand factor, type A.
     
  0.900
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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