STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_0569Creatininase. (271 aa)    
Predicted Functional Partners:
RPC_0671
Glycosyl transferase, family 2.
 
  
 0.815
RPC_0728
Putative glycosyl transferases.
  
  
 0.763
RPC_2600
Glycosyl transferase, family 2.
  
  
 0.763
RPC_0570
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like.
 
     0.747
RPC_0572
Binding-protein-dependent transport systems inner membrane component.
 
     0.727
RPC_0571
ABC transporter related.
 
     0.668
RPC_0568
Conserved hypothetical protein.
       0.586
RPC_0573
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.527
RPC_0574
Conserved hypothetical protein.
       0.515
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.