Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RPC_0664Protein involved in cellulose biosynthesis (CelD)-like. (326 aa)    
Predicted Functional Partners:
RPC_0673
Polysaccharide deacetylase.
 
   
 0.775
RPC_0663
L-proline dehydrogenase.
       0.580
RPC_0665
O-antigen polymerase.
 
   
 0.503
RPC_1775
Chromosomal replication initiator, DnaA-like.
  
     0.495
RPC_0792
Protein of unknown function DUF1465.
  
     0.451
RPC_1589
Protein of unknown function DUF1526.
  
     0.449
RPC_4240
N-acylglucosamine 2-epimerase.
  
     0.435
RPC_3707
TadE-like.
  
     0.432
RPC_0896
HAD-superfamily hydrolase, subfamily IIA.
  
     0.427
RPC_3706
TadE-like.
  
     0.407
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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