STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1784Conserved hypothetical protein. (260 aa)    
Predicted Functional Partners:
RPC_1495
Conserved hypothetical protein.
  
     0.774
RPC_1833
Conserved hypothetical protein.
  
     0.772
RPC_1512
Tetratricopeptide TPR_2.
  
     0.768
RPC_4868
Zinc finger/thioredoxin putative.
  
     0.766
RPC_1487
Conserved hypothetical protein.
  
     0.765
RPC_1510
Conserved hypothetical protein.
  
     0.764
RPC_0943
Putative flagellar assembly protein FliH.
  
     0.760
RPC_1455
Conserved hypothetical protein.
  
     0.759
RPC_2612
Putative acid-CoA ligase.
  
     0.759
RPC_1488
Conserved hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.755
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.