STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1892Citrate utilization protein B. (372 aa)    
Predicted Functional Partners:
RPC_1893
Precorrin 3B synthase CobZ.
 
 
 0.996
RPC_0704
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
  
  
 0.896
RPC_0070
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.870
napD
NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.856
RPC_4578
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.809
RPC_4645
Formate dehydrogenase, alpha subunit.
   
 
 0.809
RPC_4448
Electron transfer flavoprotein beta-subunit.
   
 
 0.808
RPC_4880
Electron transfer flavoprotein beta-subunit.
   
 
 0.808
RPC_2406
NADH-quinone oxidoreductase, E subunit.
   
 
 0.773
RPC_4068
NADH dehydrogenase (ubiquinone), 24 kDa subunit.
   
 
 0.773
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.