STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1981Biopolymer transport protein ExbD/TolR. (157 aa)    
Predicted Functional Partners:
RPC_1980
MotA/TolQ/ExbB proton channel.
 
 
 0.985
RPC_1982
TonB-like.
 
 
 0.943
RPC_0936
MotA/TolQ/ExbB proton channel.
 
 
 0.938
RPC_4540
MotA/TolQ/ExbB proton channel.
 
 
 0.938
tolQ
MotA/TolQ/ExbB proton channel; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.906
RPC_2920
MotA/TolQ/ExbB proton channel.
 
 
 0.808
RPC_0938
TonB-like.
 
 
 0.756
RPC_2992
MotA/TolQ/ExbB proton channel.
 
 
 0.744
RPC_4542
TonB-like.
  
 
 0.720
RPC_3245
Conserved hypothetical protein.
  
 
 0.717
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.