Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1982TonB-like. (266 aa)    
Predicted Functional Partners:
RPC_1981
Biopolymer transport protein ExbD/TolR.
 
 
 0.943
RPC_1980
MotA/TolQ/ExbB proton channel.
 
 
 0.942
RPC_1973
TonB-dependent haem/haemoglobin receptor.
 
 
 0.900
RPC_0937
Biopolymer transport protein ExbD/TolR.
 
 
 0.764
RPC_2906
TonB-like.
  
     0.758
RPC_4540
MotA/TolQ/ExbB proton channel.
 
 
 0.758
RPC_0936
MotA/TolQ/ExbB proton channel.
 
 
 0.742
RPC_4753
Biopolymer transport protein ExbD/TolR.
  
 
 0.720
RPC_4541
Biopolymer transport protein ExbD/TolR.
 
 
 0.712
RPC_1983
TonB-dependent receptor.
 
 
 
 0.710
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.