STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1982TonB-like. (266 aa)    
Predicted Functional Partners:
RPC_1981
Biopolymer transport protein ExbD/TolR.
 
 
 0.943
RPC_1980
MotA/TolQ/ExbB proton channel.
 
 
 0.931
RPC_1973
TonB-dependent haem/haemoglobin receptor.
 
 
 0.867
RPC_1983
TonB-dependent receptor.
 
 
 
 0.783
RPC_1976
TonB-dependent siderophore receptor.
 
 
 0.765
RPC_2906
TonB-like.
  
     0.758
RPC_0937
Biopolymer transport protein ExbD/TolR.
 
 
 0.756
RPC_3046
TonB-dependent receptor.
 
 
 0.745
RPC_4541
Biopolymer transport protein ExbD/TolR.
 
 
 0.740
RPC_3613
TonB-dependent siderophore receptor.
 
 
 0.720
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.