STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_1998MaoC-like dehydratase. (184 aa)    
Predicted Functional Partners:
RPC_0735
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.968
RPC_4048
Poly-beta-hydroxybutyrate polymerase-like.
 
 
 0.968
RPC_2819
Poly(R)-hydroxyalkanoic acid synthase, class I.
 
 
 0.962
RPC_0505
3-oxoacyl-[acyl-carrier-protein] reductase.
 0.945
RPC_0344
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.943
RPC_0858
Enoyl-CoA hydratase/isomerase.
  
 0.943
RPC_1738
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.943
RPC_3092
Enoyl-CoA hydratase/isomerase.
  
 0.943
RPC_3994
MaoC-like dehydratase.
  
  
0.924
RPC_3995
Hypothetical protein.
  
  
0.918
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.