STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_20033-oxoacid CoA-transferase, subunit A. (220 aa)    
Predicted Functional Partners:
RPC_0638
butyryl-CoA:acetate CoA transferase.
 0.999
RPC_0830
butyryl-CoA:acetate CoA transferase.
 0.999
RPC_2004
butyryl-CoA:acetate CoA transferase.
 0.999
RPC_3949
butyryl-CoA:acetate CoA transferase.
 0.999
RPC_1077
butyryl-CoA:acetate CoA transferase.
 
 0.995
RPC_0735
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.943
RPC_4481
Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.930
RPC_3950
3-oxoacid CoA-transferase, subunit A.
  
  
 
0.908
RPC_0637
3-oxoacid CoA-transferase, subunit A.
  
  
 
0.907
RPC_0635
3-keto-5-aminohexanoate cleavage enzyme.
    
 0.905
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.