STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2015Hypothetical protein. (587 aa)    
Predicted Functional Partners:
RPC_2014
Flagellar hook-associated protein.
 
  
 0.976
RPC_2013
Protein of unknown function DUF1078-like.
 
  
 0.947
RPC_0868
Flagellar protein FliS.
  
 
 0.938
RPC_1517
Flagellar basal body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.901
RPC_1485
Protein of unknown function DUF1078-like.
 
  
 0.888
RPC_3347
Surface presentation of antigens (SPOA) protein.
 
 
 0.886
RPC_1486
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.885
RPC_0943
Putative flagellar assembly protein FliH.
 
  
 0.880
fliE-2
Flagellar hook-basal body complex protein FliE.
 
 
 0.872
RPC_1508
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.861
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.