Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
RPC_2018Periplasmic sensor signal transduction histidine kinase. (488 aa)    
Predicted Functional Partners:
RPC_2017
Two component transcriptional regulator, winged helix family.
 
 
 0.960
RPC_4918
Two component transcriptional regulator, winged helix family.
 
 
 0.840
RPC_3025
Two component transcriptional regulator, winged helix family.
 
 
 0.834
RPC_3029
Two component transcriptional regulator, winged helix family.
 
 
 0.831
RPC_0655
Two component transcriptional regulator, winged helix family.
 
 
 0.829
RPC_1874
Two component transcriptional regulator, winged helix family.
 
 
 0.828
RPC_4654
Two component transcriptional regulator, winged helix family.
 
 
 0.828
RPC_1355
Hpt sensor hybrid histidine kinase.
 
 
0.825
RPC_1386
Two component transcriptional regulator, winged helix family.
 
 
 0.818
RPC_2490
Transketolase, central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.812
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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