STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2104Aminotransferase. (384 aa)    
Predicted Functional Partners:
RPC_2103
Rhodanese-like.
   
 
 0.901
RPC_2105
Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
    0.792
RPC_0109
NAD(P)H dehydrogenase (quinone).
   
    0.662
tal
Glucose-6-phosphate isomerase / transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.532
RPC_0761
Glutamate synthase (NADH) large subunit.
  
  
 0.505
RPC_4388
Anthranilate synthase, component I / anthranilate synthase, component II.
   
 
 0.488
RPC_3362
Amino acid adenylation.
  
  
 0.483
RPC_2450
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.482
RPC_3511
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.482
RPC_3369
Amino acid adenylation.
  
  
 0.479
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.