Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPC_2124Conserved hypothetical protein. (391 aa)    
Predicted Functional Partners:
RPC_2122
ATPase associated with various cellular activities, AAA_5.
 
    0.893
RPC_2125
Rhodanese-like.
       0.629
RPC_2127
3-mercaptopyruvate sulfurtransferase.
       0.599
RPC_1633
ATPase associated with various cellular activities, AAA_5.
 
    0.497
RPC_2123
Diguanylate cyclase.
       0.497
RPC_2126
Hypothetical protein.
       0.447
RPC_1156
acyl-CoA dehydrogenase-like.
  
     0.445
ispDF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
       0.432
RPC_1761
Glutathione-dependent formaldehyde-activating, GFA.
  
  
 0.430
RPC_0737
acyl-CoA dehydrogenase-like.
  
     0.427
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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