STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2273Conserved hypothetical protein. (148 aa)    
Predicted Functional Partners:
RPC_1708
Cache, type 2.
  
     0.687
RPC_2959
Putative outer membrane protein precursor.
  
     0.675
RPC_2960
Cytochrome.
  
     0.632
RPC_4545
Conserved hypothetical protein.
  
     0.562
RPC_4624
Hypothetical protein.
  
     0.550
RPC_0263
Histidine kinase, HAMP region.
 
     0.513
RPC_3225
Nitrogen fixation-related protein.
  
     0.511
RPC_1925
Hypothetical protein.
  
     0.493
RPC_0423
Conserved hypothetical protein.
  
     0.492
RPC_2056
2-hydroxyglutaryl-CoA dehydratase, D-component.
  
     0.464
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.