STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2291Cyclopropane-fatty-acyl-phospholipid synthase. (416 aa)    
Predicted Functional Partners:
RPC_2556
FAD dependent oxidoreductase.
  
 0.976
RPC_2555
Protein of unknown function DUF1365.
  
 0.958
RPC_3369
Amino acid adenylation.
     
 0.711
RPC_2292
Conserved hypothetical protein.
       0.490
RPC_3362
Amino acid adenylation.
     
 0.489
RPC_4881
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.489
RPC_3363
AMP-dependent synthetase and ligase.
  
  
 0.460
RPC_3036
Amino acid adenylation.
  
  
 0.459
RPC_1899
Conserved hypothetical protein.
 
   
 0.428
RPC_0784
Flavoprotein WrbA.
  
  
 0.400
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.