Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2469Conserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
RPC_2470
Conserved hypothetical protein.
  
    0.728
glgA
Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.563
RPC_1226
Malto-oligosyltrehalose trehalohydrolase.
   
  
 0.541
RPC_2468
PpiC-type peptidyl-prolyl cis-trans isomerase.
       0.532
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.482
RPC_3679
Trehalose synthase-like.
   
    0.475
RPC_1227
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.465
RPC_3626
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.465
RPC_3681
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.465
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.431
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.