STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2549Lysine-arginine-ornithine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. (350 aa)    
Predicted Functional Partners:
RPC_2551
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 
 0.998
RPC_2552
ABC transporter related.
 
 0.998
RPC_2550
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
 
 
 0.995
RPC_4823
Periplasmic sensor hybrid histidine kinase.
  
 
 0.561
RPC_2548
Cystathionine beta-lyase.
  
  
 0.538
RPC_3809
Serine/threonine protein kinase.
  
 
 0.473
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.451
RPC_0729
Extracellular solute-binding protein, family 3.
  
     0.447
RPC_0761
Glutamate synthase (NADH) large subunit.
  
  
 0.434
argH
Argininosuccinate lyase.
  
  
 0.433
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.