STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2694Enoyl-CoA hydratase/isomerase. (275 aa)    
Predicted Functional Partners:
RPC_3369
Amino acid adenylation.
  
 
 0.819
RPC_1674
Enoyl-CoA hydratase.
 
 
0.805
RPC_3093
acyl-CoA dehydrogenase-like.
 
 0.762
RPC_3363
AMP-dependent synthetase and ligase.
  
 0.754
rpsI
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
   
   0.745
rplM
LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
   0.735
RPC_0737
acyl-CoA dehydrogenase-like.
  
 0.727
RPC_1037
acyl-CoA dehydrogenase-like.
  
 0.727
RPC_1156
acyl-CoA dehydrogenase-like.
  
 0.727
RPC_2051
butyryl-CoA dehydrogenase.
  
 0.727
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.