STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2716NADP oxidoreductase, coenzyme F420-dependent. (304 aa)    
Predicted Functional Partners:
RPC_2714
Putative 2-pyrone-4,6-dicarbaxylate hydrolase.
 
     0.887
RPC_2717
Major facilitator superfamily MFS_1.
       0.773
RPC_2715
Major facilitator superfamily MFS_1.
       0.714
RPC_3078
Dimethylmenaquinone methyltransferase.
 
     0.694
RPC_2713
Dimethylmenaquinone methyltransferase.
 
     0.667
RPC_2726
Dimethylmenaquinone methyltransferase.
 
     0.655
RPC_2625
Dimethylmenaquinone methyltransferase.
 
     0.592
RPC_4301
Alkylhydroperoxidase AhpD core; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
  
 0.570
RPC_2718
FAD linked oxidase-like.
       0.554
RPC_2724
Amidohydrolase 2.
 
     0.533
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.