STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2768Conserved hypothetical protein. (96 aa)    
Predicted Functional Partners:
RPC_0067
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
    0.842
RPC_1972
NmrA-like.
   
    0.814
RPC_1353
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.811
RPC_1043
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
   
  
 0.793
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.780
RPC_2886
Transcriptional regulator, AraC family with amidase-like domain.
   
    0.501
RPC_2887
ThiJ/PfpI.
   
    0.501
RPC_1819
Conserved hypothetical protein.
 
    0.458
RPC_4714
Isochorismatase hydrolase.
  
    0.450
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.