STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3144Serine O-acetyltransferase. (275 aa)    
Predicted Functional Partners:
RPC_3639
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.992
RPC_2594
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.991
RPC_2023
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
 0.990
RPC_2553
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
 0.983
RPC_2024
Serine O-acetyltransferase.
  
  
 
0.927
RPC_3638
Serine O-acetyltransferase.
  
  
 
0.922
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.907
RPC_3257
Phosphoserine phosphatase.
    
 0.849
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.837
RPC_4689
Aminotransferase, class V.
  
  
 0.832
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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