Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3148Conserved hypothetical protein. (81 aa)    
Predicted Functional Partners:
nuoC-2
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
   0.934
RPC_3149
Monooxygenase, FAD-binding.
 
     0.901
RPC_3146
Alpha/beta hydrolase fold.
 
     0.869
RPC_3126
Conserved hypothetical protein.
  
     0.773
RPC_4786
Invasion associated locus B.
  
     0.773
RPC_0752
Conserved hypothetical protein.
  
     0.772
RPC_4231
Flagellar export FliJ.
  
     0.772
RPC_4328
Conserved hypothetical protein.
  
     0.771
RPC_0394
Conserved hypothetical protein.
  
     0.769
RPC_3981
Protein of unknown function DUF1036.
  
     0.761
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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