STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3206acyl-CoA dehydrogenase-like. (386 aa)    
Predicted Functional Partners:
RPC_2226
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.953
RPC_3201
Propionyl-CoA carboxylase.
 
 
 0.945
RPC_3200
Carbamoyl-phosphate synthase L chain, ATP-binding.
  
 0.931
RPC_0735
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.905
nuoC-2
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 0.818
RPC_4447
Electron transfer flavoprotein beta-subunit.
 
 0.804
RPC_4879
Electron transfer flavoprotein, alpha subunit.
 
 0.804
RPC_4448
Electron transfer flavoprotein beta-subunit.
 
 
 0.787
RPC_3369
Amino acid adenylation.
  
 
 0.767
RPC_1155
Enoyl-CoA hydratase.
 
 0.759
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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