STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3208Periplasmic sensor hybrid histidine kinase. (702 aa)    
Predicted Functional Partners:
RPC_1252
Transcriptional regulator, AraC family.
 
 
 0.972
RPC_1355
Hpt sensor hybrid histidine kinase.
 
 
0.963
RPC_2224
Periplasmic sensor hybrid histidine kinase.
 
 
0.944
RPC_4509
Multi-sensor hybrid histidine kinase.
 
 
0.933
RPC_2490
Transketolase, central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.929
RPC_3798
Hpt sensor hybrid histidine kinase.
 
 
0.921
RPC_3132
PAS/PAC sensor hybrid histidine kinase.
 
 
0.897
RPC_4889
PAS/PAC sensor hybrid histidine kinase.
 
 
0.897
RPC_0542
PAS/PAC sensor hybrid histidine kinase.
 
 
0.895
RPC_2885
PAS/PAC sensor hybrid histidine kinase.
 
 
0.895
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.