STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3284ABC-2. (255 aa)    
Predicted Functional Partners:
RPC_3283
ABC transporter related.
  
 0.984
RPC_3577
ABC transporter related.
  
 
 0.591
RPC_4664
ABC transporter related.
  
 
 0.591
RPC_3123
Nitroreductase.
  
  
 0.550
RPC_2361
Abortive infection protein.
  
  
 0.518
RPC_2199
Nitroreductase.
  
  
 0.515
RPC_3749
cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.515
RPC_3282
Conserved hypothetical protein.
       0.488
RPC_3369
Amino acid adenylation.
  
  
 0.486
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.434
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.