STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3419Alcohol dehydrogenase GroES-like; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (337 aa)    
Predicted Functional Partners:
RPC_3369
Amino acid adenylation.
  
 
 0.774
RPC_3418
Putative transcriptional regulator.
 
   
 0.678
RPC_3363
AMP-dependent synthetase and ligase.
  
 
 0.607
RPC_3036
Amino acid adenylation.
  
 
 0.603
RPC_4092
Alcohol dehydrogenase, zinc-binding.
 
     0.572
RPC_3035
Beta-ketoacyl synthase.
  
 
 0.565
RPC_3362
Amino acid adenylation.
  
 
 0.544
RPC_3417
Peptidase S1C, Do; Belongs to the peptidase S1C family.
  
  
 0.516
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.